Package: phylosignal 1.3.1
phylosignal: Exploring the Phylogenetic Signal in Continuous Traits
A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.
Authors:
phylosignal_1.3.1.tar.gz
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phylosignal_1.3.1.tgz(r-4.4-x86_64)phylosignal_1.3.1.tgz(r-4.4-arm64)phylosignal_1.3.1.tgz(r-4.3-x86_64)phylosignal_1.3.1.tgz(r-4.3-arm64)
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phylosignal.pdf |phylosignal.html✨
phylosignal/json (API)
# Install 'phylosignal' in R: |
install.packages('phylosignal', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fkeck/phylosignal/issues
- navic - Phylogeny and pollution sensitivity of diatoms
Last updated 11 months agofrom:dfa59275a5. Checks:OK: 9. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 06 2024 |
R-4.5-win-x86_64 | OK | Sep 06 2024 |
R-4.5-linux-x86_64 | OK | Sep 06 2024 |
R-4.4-win-x86_64 | OK | Sep 06 2024 |
R-4.4-mac-x86_64 | OK | Sep 06 2024 |
R-4.4-mac-aarch64 | OK | Sep 06 2024 |
R-4.3-win-x86_64 | OK | Sep 06 2024 |
R-4.3-mac-x86_64 | OK | Sep 06 2024 |
R-4.3-mac-aarch64 | OK | Sep 06 2024 |
Exports:barplot.phylo4ddescentsNamesdirectDescentsdistEqdotplotdotplot.phylo4devenColorsfocusStopfocusTipsfocusTraitsfocusTreegraphClustgridplotgridplot.phylo4dkStarTestkTestlambdaTestlipaMoranmantelStatmatchTipsAndTraitsmoranTestmultiplot.phylo4dpagelLogLikphyloCorrelogramphyloSignalphyloSignalBSphyloSignalINTphyloSimphyloSimSignalphyloWeightsplot.graphclustplot.phylocorrelogramplot.phylosimplot.phylosimsignalprint.graphclustprint.phylosimsignalread.p4drTraitContWeightsubsetPhyloSimSignalwhite2red
Dependencies:ade4adegenetadephyloapeaskpassbase64encbootbslibcachemcliclustercolorspacecommonmarkcpp11crayoncurlDBIdigestdplyrfansifarverfastmapfontawesomefsgenericsggplot2gluegtablehmshtmltoolshttpuvhttrigraphisobandjquerylibjsonlitelabelinglaterlatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpermutephylobasepillarpixmappkgconfigplyrprettyunitsprogresspromisespurrrR6rappdirsRColorBrewerRcppRcppArmadilloreshape2rlangrnclRNeXMLsassscalessegmentedseqinrshinysourcetoolsspstringistringrsystibbletidyrtidyselectutf8uuidvctrsveganviridisLitewithrXMLxml2xtable