Jeremy M. Beaulieu and Brian C. O'Meara
Rendered fromOUwie_2.1_adds.Rmd
in OUwie 2.13.Martin R. Smith
Rendered fromUsing-TreeDist.Rmd
in TreeDist 2.9.1.Martin R. Smith
Rendered fromusing-distances.Rmd
in TreeDist 2.9.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromRRphylo.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromsearch.conv.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromsearch.shift.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromsearch.trend.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromTree-Manipulation.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromoverfitRR.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromPlotting-tools.Rmd
in RRphylo 2.8.1.Silvia Castiglione, Carmela Serio, Pasquale Raia
Rendered fromswapONE.Rmd
in RRphylo 2.8.1.Klaus Schliep
Rendered fromAncestral.Rmd
in phangorn 3.0.0.0.Martin R. Smith
Rendered fromtreespace.Rmd
in TreeDist 2.9.1.Martin R. Smith
Rendered fromRobinson-Foulds.Rmd
in TreeDist 2.9.1.Michael Collyer
Rendered fromUsing.RRPP.Rmd
in RRPP 2.0.3.999.Gene Hunt
Rendered frompaleoTS_basics.Rmd
in paleoTS 0.6.1.Michael L. Collyer
Rendered fromANOVA.vs.MANOVA.Rmd
in RRPP 2.0.3.999.Orlando Schwery
Rendered fromMonoPhyVignette.Rmd
in MonoPhy 1.3.1.Luna L. Sanchez Reyes
Rendered fromfringiliidae.Rmd
in datelife 0.6.9.Luna L. Sanchez Reyes
Rendered fromGetting_started_with_datelife.Rmd
in datelife 0.6.9.Luna L. Sanchez Reyes
Rendered frommake_datelife_query.Rmd
in datelife 0.6.9.Martin R. Smith
Rendered fromGeneralized-RF.Rmd
in TreeDist 2.9.1.Emmanuel Paradis
Rendered fromDrawingPhylogenies.Rnw
in ape 5.8-0.2.Jari Oksanen
Rendered fromintro-vegan.Rnw
in vegan 2.7-0.Jari Oksanen
Rendered fromFAQ-vegan.Rmd
in vegan 2.7-0.Sandra Álvarez-Carretero and Mario dos Reis
Rendered fromReproduce_Carnivora_analysis.Rmd
in mcmc3r 0.5.6.Emmanuel Paradis
Rendered fromRandomTopologies.Rnw
in ape 5.8-0.2.Klaus Schliep, Iris Bardel-Kahr
Rendered fromAdvancedFeatures.Rmd
in phangorn 3.0.0.0.Carl Boettiger
Rendered fromvignette.Rmd
in treebase 0.1.5.Ben Bolker, Peter Cowan, François Michonneau
Rendered fromphylobase.Rmd
in phylobase 0.8.12.Thibaut Jombart
Rendered fromapex.Rmd
in apex 1.0.6.Luna L. Sanchez Reyes
Rendered fromfringiliidae.Rmd
in datelife 0.6.9.Luna L. Sanchez Reyes
Rendered fromGetting_started_with_datelife.Rmd
in datelife 0.6.9.Luna L. Sanchez Reyes
Rendered frommake_datelife_query.Rmd
in datelife 0.6.9.Martin R. Smith, Durham University
Rendered fromBayesian.Rmd
in Rogue 2.1.6.Aurélie Siberchicot
Rendered fromadephylo.Rnw
in adephylo 1.1-16.Thijs Janzen
Rendered fromstarting_secsse.Rmd
in secsse 3.1.0.Pedro Santos Neves
Rendered fromcomplete_tree.Rmd
in secsse 3.1.0.Martin R. Smith
Rendered fromprofile.Rmd
in TreeSearch 1.5.1.Jeremy M. Beaulieu
Rendered fromadding_fossils.Rmd
in hisse 2.1.13.Jeremy M. Beaulieu
Rendered fromClade-specific-sampling.Rmd
in hisse 2.1.13.Thijs Janzen
Rendered fromplotting_states.Rmd
in secsse 3.1.0.Thijs Janzen
Rendered fromsim_with_secsse.Rmd
in secsse 3.1.0.Tiago Simoes
Rendered fromrates-selection_MrBayes.Rmd
in EvoPhylo 0.3.3.Martin R. Smith
Rendered fromtree-space.Rmd
in TreeSearch 1.5.1.Martin R. Smith
Rendered fromgetting-started.Rmd
in TreeSearch 1.5.1.Martin R. Smith
Rendered fromtree-search.Rmd
in TreeSearch 1.5.1.Martin R. Smith
Rendered fromprofile-scores.Rmd
in TreeSearch 1.5.1.Martin R. Smith
Rendered fromcustom.Rmd
in TreeSearch 1.5.1.Eric Marcon
Rendered fromentropart.Rmd
in entropart 1.6-13.9001.Martin R. Smith [email protected]
Rendered fromload-data.Rmd
in TreeTools 1.12.0.9000.Martin R. Smith [email protected]
Rendered fromload-trees.Rmd
in TreeTools 1.12.0.9000.Shixiang Wang
Rendered fromphylotaR.Rmd
in phylotaR 1.3.0.Iris Bardel-Kahr, Klaus Schliep
Rendered fromMorphological.Rmd
in phangorn 3.0.0.0.Klaus Schliep, Alastair Potts, David Morrison and Guido Grimm
Rendered fromIntertwiningTreesAndNetworks.Rmd
in phangorn 3.0.0.0.David Winter
Rendered fromdata_mashups.Rmd
in rotl 3.1.0.François Michonneau
Rendered fromrotl.Rmd
in rotl 3.1.0.David Winter
Rendered frommeta-analysis.Rmd
in rotl 3.1.0.Klaus Schliep, Iris Bardel-Kahr
Rendered fromTrees.Rmd
in phangorn 3.0.0.0.Martin R. Smith
Rendered fromlandscapes.Rmd
in TreeDist 2.9.1.Carl Boettiger
Rendered frompmc_tutorial.Rmd
in pmc 1.0.6.Thibaut Jombart, Michelle Kendall
Rendered fromintroduction.Rmd
in treespace 1.1.4.3.Tal Galili
Rendered fromdendextend.Rmd
in dendextend 1.18.0.Klaus Schliep, Iris Bardel-Kahr
Rendered fromMLbyHand.Rmd
in phangorn 3.0.0.0.Klaus Schliep
Rendered fromNetworx.Rmd
in phangorn 3.0.0.0.Julien Clavel
Rendered fromHow_to_use_mvMORPH.Rmd
in mvMORPH 1.2.1.Martin R. Smith
Rendered fromdifferent-leaves.Rmd
in TreeDist 2.9.1..
Rendered fromhOUwieStarterGuide.Rmd
in OUwie 2.13.Luna L. Sanchez Reyes
Rendered frommaking_bold_trees.Rmd
in datelife 0.6.9.Luna L. Sanchez Reyes
Rendered frommaking_bold_trees.Rmd
in datelife 0.6.9.Michelle Jonika, Jeffery Demuth, and Richard A. Adams, and Heath Blackmon
Rendered fromevolutionary.biology.in.R.Rmd
in evobiR 2.1.Scott Chamberlain and Jeroen Ooms
Rendered fromphylocomr.Rmd
in phylocomr 0.3.4.Barnabas H. Daru, Piyal Karunarathne & Klaus Schliep
Rendered fromphyloregion-intro.Rmd
in phyloregion 1.0.9.Barnabas H. Daru, Piyal Karunarathne & Klaus Schliep
Rendered fromBenchmark.Rmd
in phyloregion 1.0.9.Barnabas H. Daru
Rendered fromed.Rmd
in phyloregion 1.0.9.Tiago Simoes
Rendered fromfbd-params.Rmd
in EvoPhylo 0.3.3.Tiago Simoes
Rendered fromrates-selection_BEAST2.Rmd
in EvoPhylo 0.3.3.Tiago Simoes
Rendered fromchar-part.Rmd
in EvoPhylo 0.3.3.Tiago Simoes
Rendered fromoffset_handling.Rmd
in EvoPhylo 0.3.3.Tiago Simoes
Rendered fromdata_treatment.Rmd
in EvoPhylo 0.3.3.Martin R. Smith
Rendered frominformation.Rmd
in TreeDist 2.9.1.Martin R. Smith
Rendered fromQuartet-Distance.Rmd
in Quartet 1.2.6.9001.Tal Galili
Rendered fromCluster_Analysis.Rmd
in dendextend 1.18.0.Tal Galili
Rendered fromFAQ.Rmd
in dendextend 1.18.0.Daniel S. Caetano
Rendered fromSet_custom_starting_point.Rmd
in ratematrix 1.2.4.Richèl J.C. Bilderbeek
Rendered fromdemo.Rmd
in beastier 2.5.2.Richèl J.C. Bilderbeek
Rendered fromdemo.Rmd
in beautier 2.6.13.Richèl J.C. Bilderbeek
Rendered fromexamples.Rmd
in beautier 2.6.13.Richèl J.C. Bilderbeek
Rendered frominference_models.Rmd
in beautier 2.6.13.Martin R. Smith
Rendered fromUsing-Quartet.Rmd
in Quartet 1.2.6.9001.Martin R. Smith
Rendered fromcompare-treesets.Rmd
in TreeDist 2.9.1.Bruno do Rosario Petrucci
Rendered fromoverview.Rmd
in paleobuddy 1.0.0.9000.Samuel R. Borstein
Rendered fromdietr-vignette.Rmd
in dietr 1.1.4.George G. Vega Yon
Rendered fromexample.Rmd
in aphylo 0.3-4.Jeremy M. Beaulieu
Rendered fromMiSSE-vignette.Rmd
in hisse 2.1.13.Martin R. Smith [email protected]
Rendered fromfilesystem-navigation.Rmd
in TreeTools 1.12.0.9000.Josef Uyeda, Cristian Roman-Palacios, April Wright
Rendered fromD_AdditionalFunctions_treedata.table.Rmd
in treedata.table 0.1.1.Cristian Roman-Palacios, April Wright, Josef Uyeda
Rendered fromAB_treedata.table_intro_spanish.Rmd
in treedata.table 0.1.1.Josef Uyeda, Cristian Roman-Palacios, April Wright
Rendered fromAA_treedata.table_intro_english.Rmd
in treedata.table 0.1.1.Josef Uyeda, Cristian Roman-Palacios, April Wright
Rendered fromC_PartialMatching.Rmd
in treedata.table 0.1.1.Josef Uyeda, Cristian Roman-Palacios, April Wright
Rendered fromB_multiphylo_treedata.table.Rmd
in treedata.table 0.1.1.Gabriel Nakamura
Rendered fromFishPhyloMaker_vignette.Rmd
in FishPhyloMaker 0.2.0.Gabriel Nakamura
Rendered fromwhichFishAdd_vignette.Rmd
in FishPhyloMaker 0.2.0.Gabriel Nakamura
Rendered frommappingInsertions_vignette.Rmd
in FishPhyloMaker 0.2.0.Felipe Campelo
Rendered fromCALANGO_Parameters.Rmd
in CALANGO 1.0.20.Guangchuang Yu School of Basic Medical Sciences, Southern Medical University
Rendered fromtidytree.Rmd
in tidytree 0.4.6.002.Jeremy M. Beaulieu
Rendered fromhisse-new-vignette.Rmd
in hisse 2.1.13.Jeremy M. Beaulieu
Rendered fromMuHiSSE-vignette.Rmd
in hisse 2.1.13.Richèl J.C. Bilderbeek
Rendered fromdemo.Rmd
in tracerer 2.2.3.Joelle Barido-Sottani
Rendered fromSAtree.Rmd
in FossilSim 2.4.0.Joelle Barido-Sottani, Rachel C. M. Warnock
Rendered fromintro.Rmd
in FossilSim 2.4.0.Jinlong Zhang
Rendered fromphylotools-vignette.Rmd
in phylotools 0.2.4.Michelle Kendall
Rendered fromTransmissionTreesVignette.Rmd
in treespace 1.1.4.3.Jeremy M. Beaulieu
Rendered fromhisse-vignette.Rmd
in hisse 2.1.13.Wei-Chen Chen
Rendered fromphyclust-guide.Rnw
in phyclust 0.1-34.Daniel Caetano and Jeremy M. Beaulieu
Rendered fromGeoHiSSE-vignette.Rmd
in hisse 2.1.13.Emmanuel Paradis
Rendered fromMoranI.Rnw
in ape 5.8-0.2.Michelle Kendall, Thibaut Jombart
Rendered fromDengueVignette.Rmd
in treespace 1.1.4.3.Michelle Kendall
Rendered fromtipCategories.Rmd
in treespace 1.1.4.3.Samuel R. Borstein
Rendered fromAnnotationBustR-vignette.Rmd
in AnnotationBustR 1.3.0.Martin R. Smith
Rendered fromTBRDist.Rmd
in TBRDist 1.0.2.Tal Galili
Rendered fromQuick_Introduction.Rmd
in dendextend 1.18.0.David W. Bapst
Rendered fromtreevo_ABC_vignette.Rmd
in TreEvo 0.22.1.Antigoni Kaliontzopoulou
Rendered fromgeomorph.digitize3D.Rmd
in geomorph 4.0.8.Nathan Jackson
Rendered fromphrapl_vignette.Rmd
in phrapl 0.6.5.Daniel S. Caetano
Rendered fromIntro_on_the_package.Rmd
in ratematrix 1.2.4.Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp
Rendered fromintro.Rmd
in RNeXML 2.4.11.Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp
Rendered fromsimmap.Rmd
in RNeXML 2.4.11.Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp
Rendered fromsparql.Rmd
in RNeXML 2.4.11.Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp
Rendered frommetadata.Rmd
in RNeXML 2.4.11.Carl Boettiger, Scott Chamberlain, Rutger Vos, Hilmar Lapp
Rendered fromS4.Rmd
in RNeXML 2.4.11.Erik Volz
Rendered fromh3n2.Rmd
in treedater 0.5.3.Gustavo Paterno, Caterina Penone, Gijsbert Werner
Rendered fromsensiPhy_vignette.Rmd
in sensiPhy 0.8.5.Walker Pett
Rendered fromsimfbd.Rmd
in FossilSim 2.4.0.Daniel S. Caetano
Rendered fromMaking_prior_on_ratematrix.Rmd
in ratematrix 1.2.4.Steven W. Kembel
Rendered frompicante-intro.Rnw
in picante 1.8.3.Shaun Wilkinson
Rendered fromaphid-vignette.Rmd
in aphid 1.3.3.9000.Francois Keck
Rendered fromBasics.Rmd
in phylosignal 1.3.1.Francois Keck
Rendered fromDemo_plots.Rmd
in phylosignal 1.3.1.Jeremy M. Beaulieu & Brian C. O'Meara
Rendered fromhisse-fisse-type1-vignette.Rmd
in hisse 2.1.13.Rachel C. M. Warnock
Rendered fromfossils.Rmd
in FossilSim 2.4.0.Joelle Barido-Sottani, Rachel C. M. Warnock
Rendered fromtaxonomy.Rmd
in FossilSim 2.4.0.Joelle Barido-Sottani
Rendered frompaleotree.Rmd
in FossilSim 2.4.0.Shaun P. Wilkinson ^1,2^ and Simon K. Davy ^1^
Rendered fromphylogram-vignette.Rmd
in phylogram 2.1.0.9000.Jari Oksanen
Rendered fromdiversity-vegan.Rnw
in vegan 2.7-0.zach charlop-powers
Rendered fromAdvanced_Usage.Rmd
in phylocanvas 0.1.3.Zach Chrlop-Powers
Rendered fromBasic_Use.Rmd
in phylocanvas 0.1.3.Jari Oksanen
Rendered fromdecision-vegan.Rnw
in vegan 2.7-0.Julien Clavel
Rendered fromtutorial_mvMORPH.Rmd
in mvMORPH 1.2.1.Jari Oksanen
Rendered frompartitioning.Rnw
in vegan 2.7-0.