Package: phylogram 2.1.0.9000

Shaun Wilkinson

phylogram: Dendrograms for Evolutionary Analysis

Contains functions for developing phylogenetic trees as deeply-nested lists ("dendrogram" objects). Enables bi-directional conversion between dendrogram and "phylo" objects (see Paradis et al (2004) <doi:10.1093/bioinformatics/btg412>), and features several tools for command-line tree manipulation and import/export via Newick parenthetic text.

Authors:Shaun Wilkinson [aut, cre], Simon Davy [aut]

phylogram_2.1.0.9000.tar.gz
phylogram_2.1.0.9000.zip(r-4.5)phylogram_2.1.0.9000.zip(r-4.4)phylogram_2.1.0.9000.zip(r-4.3)
phylogram_2.1.0.9000.tgz(r-4.4-any)phylogram_2.1.0.9000.tgz(r-4.3-any)
phylogram_2.1.0.9000.tar.gz(r-4.5-noble)phylogram_2.1.0.9000.tar.gz(r-4.4-noble)
phylogram_2.1.0.9000.tgz(r-4.4-emscripten)phylogram_2.1.0.9000.tgz(r-4.3-emscripten)
phylogram.pdf |phylogram.html✨
phylogram/json (API)

# Install 'phylogram' in R:
install.packages('phylogram', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/phylogram/issues

On CRAN:

peer-reviewed

6.49 score 11 stars 9 packages 209 scripts 901 downloads 11 exports 5 dependencies

Last updated 5 years agofrom:9b7ce7672a. Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKOct 29 2024
R-4.5-winOKOct 29 2024
R-4.5-linuxOKOct 29 2024
R-4.4-winOKOct 29 2024
R-4.4-macOKOct 29 2024
R-4.3-winOKOct 29 2024
R-4.3-macOKOct 29 2024

Exports:as.cladogramas.dendrogramas.dendrogram.phyloas.phyloas.phylo.dendrogramladderpruneread.dendrogramremidpointrepositionwrite.dendrogram

Dependencies:apedigestlatticenlmeRcpp

phylogram: an R package for phylogenetic analysis with dendrograms

Shaun P. Wilkinson ^1,2^ and Simon K. Davy ^1^

Rendered fromphylogram-vignette.Rmdusingknitr::rmarkdownon Oct 29 2024.

Last update: 2018-06-26
Started: 2017-01-18