Package: mcmc3r 0.5.6
mcmc3r: Tools to work with MCMCtree
Tools to work with MCMCtree, a program for Bayesian inference of species divergence times.
Authors:
mcmc3r_0.5.6.tar.gz
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mcmc3r.pdf |mcmc3r.html✨
mcmc3r/json (API)
# Install 'mcmc3r' in R: |
install.packages('mcmc3r', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dosreislab/mcmc3r/issues
- A - A matrix
- C - 29 3D landmarks from the skulls of 19 carnivoran specimens after Procrustes analysis
- C.PS - Object of class procSym output by Morpho after PA
- C.arr.unal - 29 3D landmarks from the skulls of 19 carnivoran specimens before Procrustes analysis
- C.mat.unal - 29 3D landmarks from the skulls of 19 carnivoran specimens before Procrustes analysis
- R.sh - Estimated shrinkage correlation matrix
- V - 29 3D landmarks from the skulls of 19 carnivoran specimens after Procrustes analysis
- V.PS.nov1 - Object of class array output by Morpho after PA
- V.arr.unal - 29 3D landmarks from the skulls of 21 Vulpes vulpes specimens before Procrustes analysis
- V.mat.unal - 29 3D landmarks from the skulls of 19 carnivoran specimens before Procrustes analysis
- carnivores - Carnivores dataset
- carnivores19x29.raw - 29 3D landmarks from the skulls of 19 carnivoran specimens
- hominids - A BPP A00 MCMC sample for an hominid phylogeny
- microcebus - A BPP A00 MCMC sample for a mouse lemur phylogeny
- sim.R - Correlation matrix for simulations
- sim.tree - Simulated 8-species tree
- var.foxes - Vector with the population variance of Vulpes vulpes
- vulpes21x29.raw - 29 3D landmarks from the skulls of 21 Vulpes vulpes specimens
Last updated 2 months agofrom:8d3f3b1c57. Checks:OK: 1 NOTE: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 15 2024 |
R-4.5-win | NOTE | Aug 15 2024 |
R-4.5-linux | NOTE | Aug 15 2024 |
R-4.4-win | NOTE | Aug 15 2024 |
R-4.4-mac | NOTE | Aug 15 2024 |
R-4.3-win | NOTE | Aug 15 2024 |
R-4.3-mac | NOTE | Aug 15 2024 |
Exports:array2matrixbayes.factorsblock.bootctlMCMCtreedBdBDdLdUgauss.quadgauss.quad.bootlmk_impmake.betamake.bfctlfmatrix2arraymcmc.summcmc2ancmcmc2densitreepLproc2MCMCtreeqLsim.morphosim.popstepping.stonesstepping.stones.boottreeMCMCtreewrite.morpho