Package: tracerer 2.2.3
![](https://r-universe.dev/static/nobody.jpg)
Richèl J.C. Bilderbeek
tracerer: Tracer from R
'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'Tracer' (<https://github.com/beast-dev/tracer/>) is a GUI tool to parse and analyze the files generated by 'BEAST2'. This package provides a way to parse and analyze 'BEAST2' input files without active user input, but using R function calls instead.
Authors:
tracerer_2.2.3.tar.gz
tracerer_2.2.3.zip(r-4.5)tracerer_2.2.3.zip(r-4.4)tracerer_2.2.3.zip(r-4.3)
tracerer_2.2.3.tgz(r-4.4-x86_64)tracerer_2.2.3.tgz(r-4.4-arm64)tracerer_2.2.3.tgz(r-4.3-x86_64)tracerer_2.2.3.tgz(r-4.3-arm64)
tracerer_2.2.3.tar.gz(r-4.5-noble)tracerer_2.2.3.tar.gz(r-4.4-noble)
tracerer_2.2.3.tgz(r-4.4-emscripten)tracerer_2.2.3.tgz(r-4.3-emscripten)
tracerer.pdf |tracerer.html✨
tracerer/json (API)
NEWS
# Install 'tracerer' in R: |
install.packages('tracerer', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/tracerer/issues
Last updated 12 months agofrom:82c8d826a0. Checks:OK: 4 NOTE: 5. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 06 2024 |
R-4.5-win-x86_64 | NOTE | Sep 06 2024 |
R-4.5-linux-x86_64 | NOTE | Sep 06 2024 |
R-4.4-win-x86_64 | NOTE | Sep 06 2024 |
R-4.4-mac-x86_64 | NOTE | Sep 06 2024 |
R-4.4-mac-aarch64 | NOTE | Sep 06 2024 |
R-4.3-win-x86_64 | OK | Sep 06 2024 |
R-4.3-mac-x86_64 | OK | Sep 06 2024 |
R-4.3-mac-aarch64 | OK | Sep 06 2024 |
Exports:calc_actcalc_act_rcalc_esscalc_essescalc_geom_meancalc_hpd_intervalcalc_modecalc_stderr_meancalc_summary_statscalc_summary_stats_tracecalc_summary_stats_tracescheck_tracecount_trees_in_filecs_std_devextract_operators_linesget_tracerer_pathget_tracerer_pathsget_tracerer_tempfilenameis_posterioris_trees_fileis_trees_posteriorparse_beast_logparse_beast_output_filesparse_beast_posteriorparse_beast_state_operatorsparse_beast_tracelog_fileparse_beast_treesremove_burn_inremove_burn_inssave_beast_estimatessave_beast_trees