Package: popularitree 0.0.0.9000

Brian OMeara

popularitree: Subsamples a tree to get popular taxa

Often you want to show a reduced summary tree. Taxa chosen should span all the tree (for example, a tree of mammals should not have just primates) but also be recognizable groups to your audience. This lets you select a final tree size you want, criteria you want to use, and finds the tree that maximizes the criteria.

Authors:Brian O'Meara [aut, cre]

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popularitree.pdf |popularitree.html✨
popularitree/json (API)

Peer review:

Bug tracker:https://github.com/bomeara/popularitree/issues

On CRAN:

7 exports 0.00 score 128 dependencies

Last updated 7 years agofrom:ce3e5899c0. Checks:OK: 7. Indexed: no.

Exports:generate_samplepopularitreespecies_get_commonspecies_gtrends_popularityspecies_ncbi_common_existstree_compute_measurestree_convert_to_common

Dependencies:anytimeapeaskpassassertthatbackportsbase64encBHbitbit64boldbslibcachemcheckmateclicliprclustercodetoolscolorspacecpp11crayoncrulcurldata.tabledigestdplyrevaluatefansifarverfastmapfastmatchfontawesomeforeachforeignFormulafsgenericsggplot2ggseqlogogluegridExtragtablegtrendsRhighrHmischmshtmlTablehtmltoolshtmlwidgetshttpcodehttrigraphisobanditeratorsjquerylibjsonliteknitrlabelinglatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnatservnlmennetopensslpbapplypermutephangornpicantepillarpkgconfigplyrprettyunitsprogresspurrrquadprogR6rappdirsratelimitrRColorBrewerRcppreadrrentrezrexritisrlangrmarkdownrnclrotlrpartrredlistrstudioapisassscalessolriumstringistringrsystaxizetibbletidyselecttinytextriebeardtzdburltoolsutf8vctrsveganviridisviridisLitevroomWikidataQueryServiceRWikidataRWikipediRwikitaxawithrworrmsxfunXMLxml2yamlzoo