Package: pmc 1.0.6
pmc: Phylogenetic Monte Carlo
Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.
Authors:
pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.5)pmc_1.0.6.zip(r-4.4)pmc_1.0.6.zip(r-4.3)
pmc_1.0.6.tgz(r-4.4-any)pmc_1.0.6.tgz(r-4.3-any)
pmc_1.0.6.tar.gz(r-4.5-noble)pmc_1.0.6.tar.gz(r-4.4-noble)
pmc_1.0.6.tgz(r-4.4-emscripten)pmc_1.0.6.tgz(r-4.3-emscripten)
pmc.pdf |pmc.html✨
pmc/json (API)
NEWS
# Install 'pmc' in R: |
install.packages('pmc', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cboettig/pmc/issues
Last updated 11 months agofrom:2b0b649879. Checks:OK: 7. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 28 2024 |
R-4.5-win | OK | Aug 28 2024 |
R-4.5-linux | OK | Aug 28 2024 |
R-4.4-win | OK | Aug 28 2024 |
R-4.4-mac | OK | Aug 28 2024 |
R-4.3-win | OK | Aug 28 2024 |
R-4.3-mac | OK | Aug 28 2024 |
Dependencies:apecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfansifarverfastmatchforeachgeigergenericsggplot2ggseqlogogluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmgcvmnormtmunsellmvtnormncbitnlmenumDerivoptimParallelouchphangornphytoolspillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangscalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
The anoles data set | anoles |
pmc | pmc |
Fit any model used in PMC | pmc_fit |
simulate gfit | simulate.gfit |
The phylogeny for the anoles data set | tree |
update gfit | update.gfit |