Package: pmc 1.0.6

Carl Boettiger

pmc: Phylogenetic Monte Carlo

Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.

Authors:Carl Boettiger [aut, cre]

pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.5)pmc_1.0.6.zip(r-4.4)pmc_1.0.6.zip(r-4.3)
pmc_1.0.6.tgz(r-4.4-any)pmc_1.0.6.tgz(r-4.3-any)
pmc_1.0.6.tar.gz(r-4.5-noble)pmc_1.0.6.tar.gz(r-4.4-noble)
pmc_1.0.6.tgz(r-4.4-emscripten)pmc_1.0.6.tgz(r-4.3-emscripten)
pmc.pdf |pmc.html✨
pmc/json (API)
NEWS

# Install 'pmc' in R:
install.packages('pmc', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/cboettig/pmc/issues

Datasets:
  • anoles - The anoles data set
  • tree - The phylogeny for the anoles data set

On CRAN:

2 exports 2 stars 1.83 score 65 dependencies 4 mentions 10 scripts 482 downloads

Last updated 11 months agofrom:2b0b649879. Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKAug 28 2024
R-4.5-winOKAug 28 2024
R-4.5-linuxOKAug 28 2024
R-4.4-winOKAug 28 2024
R-4.4-macOKAug 28 2024
R-4.3-winOKAug 28 2024
R-4.3-macOKAug 28 2024

Exports:pmcpmc_fit

Dependencies:apecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfansifarverfastmatchforeachgeigergenericsggplot2ggseqlogogluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmgcvmnormtmunsellmvtnormncbitnlmenumDerivoptimParallelouchphangornphytoolspillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangscalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr

pmc tutorial

Carl Boettiger

Rendered frompmc_tutorial.Rmdusingknitr::rmarkdownon Aug 28 2024.

Last update: 2023-04-04
Started: 2015-06-23