Package: pmc 1.0.6

Carl Boettiger

pmc: Phylogenetic Monte Carlo

Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.

Authors:Carl Boettiger [aut, cre]

pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.7)pmc_1.0.6.zip(r-4.6)pmc_1.0.6.zip(r-4.5)
pmc_1.0.6.tgz(r-4.6-any)pmc_1.0.6.tgz(r-4.5-any)
pmc_1.0.6.tar.gz(r-4.7-any)pmc_1.0.6.tar.gz(r-4.6-any)
pmc_1.0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
pmc/json (API)
NEWS

# Install 'pmc' in R:
install.packages('pmc', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cboettig/pmc/issues

Datasets:
  • anoles - The anoles data set
  • tree - The phylogeny for the anoles data set

On CRAN:

Conda:

4.64 score 2 stars 11 scripts 274 downloads 4 mentions 2 exports 70 dependencies

Last updated from:2b0b649879. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK220
source / vignettesOK215
linux-release-x86_64OK210
macos-release-arm64OK128
macos-oldrel-arm64OK137
windows-develOK146
windows-releaseOK199
windows-oldrelOK155
wasm-releaseOK144

Exports:pmcpmc_fit

Dependencies:apebackportscheckmatecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfarverforeachfuturefuture.applygeigergenericsggplot2globalsgluegtableigraphisobanditeratorslabelinglatticelifecyclelistenvmagrittrmapsMASSMatrixmnormtmvtnormncbitnlmenumDerivoptimParallelosqpouchparallellyphangornphytoolspillarpkgconfigprogressrpurrrR6RColorBrewerRcppRcppArmadillorlangS7scalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr

pmc tutorial

Carl Boettiger

Rendered frompmc_tutorial.Rmdusingknitr::rmarkdownon May 10 2026.

Last update: 2023-04-04
Started: 2015-06-23