Package: pmc 1.0.6

Carl Boettiger

pmc: Phylogenetic Monte Carlo

Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.

Authors:Carl Boettiger [aut, cre]

pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.5)pmc_1.0.6.zip(r-4.4)pmc_1.0.6.zip(r-4.3)
pmc_1.0.6.tgz(r-4.5-any)pmc_1.0.6.tgz(r-4.4-any)pmc_1.0.6.tgz(r-4.3-any)
pmc_1.0.6.tar.gz(r-4.5-noble)pmc_1.0.6.tar.gz(r-4.4-noble)
pmc_1.0.6.tgz(r-4.4-emscripten)pmc_1.0.6.tgz(r-4.3-emscripten)
pmc.pdf |pmc.html✨
pmc/json (API)
NEWS

# Install 'pmc' in R:
install.packages('pmc', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cboettig/pmc/issues

Datasets:
  • anoles - The anoles data set
  • tree - The phylogeny for the anoles data set

On CRAN:

Conda:

4.60 score 2 stars 10 scripts 424 downloads 4 mentions 2 exports 66 dependencies

Last updated 1 years agofrom:2b0b649879. Checks:8 OK. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKFeb 24 2025
R-4.5-winOKFeb 24 2025
R-4.5-macOKFeb 24 2025
R-4.5-linuxOKFeb 24 2025
R-4.4-winOKFeb 24 2025
R-4.4-macOKFeb 24 2025
R-4.3-winOKFeb 24 2025
R-4.3-macOKFeb 24 2025

Exports:pmcpmc_fit

Dependencies:apebackportscheckmatecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfansifarverforeachgeigergenericsggplot2gluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmgcvmnormtmunsellmvtnormncbitnlmenumDerivoptimParallelouchphangornphytoolspillarpkgconfigpurrrquadprogR6RColorBrewerRcppRcppArmadillorlangscalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr

pmc tutorial

Carl Boettiger

Rendered frompmc_tutorial.Rmdusingknitr::rmarkdownon Feb 24 2025.

Last update: 2023-04-04
Started: 2015-06-23