Package: phyloTop 2.1.3

Michelle Kendall

phyloTop: Calculating Topological Properties of Phylogenies

Tools for calculating and viewing topological properties of phylogenetic trees.

Authors:Michelle Kendall [aut, cre], Michael Boyd [aut], Caroline Colijn [aut]

phyloTop_2.1.3.tar.gz
phyloTop_2.1.3.zip(r-4.7)phyloTop_2.1.3.zip(r-4.6)phyloTop_2.1.3.zip(r-4.5)
phyloTop_2.1.3.tgz(r-4.6-any)phyloTop_2.1.3.tgz(r-4.5-any)
phyloTop_2.1.3.tar.gz(r-4.7-any)phyloTop_2.1.3.tar.gz(r-4.6-any)
phyloTop_2.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
phyloTop/json (API)

# Install 'phyloTop' in R:
install.packages('phyloTop', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/michellekendall/phylotop/issues

Pkgdown/docs site:https://michellekendall.github.io

On CRAN:

Conda:

3.88 score 1 stars 62 scripts 1.2k downloads 2 mentions 27 exports 95 dependencies

Last updated from:7043fa2d12. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK160
source / vignettesOK195
linux-release-x86_64OK193
macos-release-arm64OK140
macos-oldrel-arm64OK114
windows-develOK112
windows-releaseOK109
windows-oldrelOK109
wasm-releaseOK148

Exports:avgLaddercherriescolless.phyloconfigShowgetDepthsgetLabGenealogyILnumberladderShowladderSizesmakeEpiRecordmakePhyloTreemaxHeightnConfignodeDepthnodeDepthFracnodeImbnodeImbFracphyloCheckphyloToppitchforksrtree4sackin.phylosplitTopstairssubtreeShowtreeImbwidths

Dependencies:abindade4apeaskpassbackportsbootbroomcarcarDataclicolorspacecowplotcpp11crayoncurlDerivdigestdoBydplyrfarverforecastFormulafracdiffgenericsggplot2gluegtablehmshttrigraphisobandjsonlitelabelinglatticelifecyclelme4lmtestmagrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkmimeminqamodelrNHPoissonnlmenloptrnnetnumDerivopensslpbkrtestphylobasepillarpixmappkgconfigplyrprettyunitsprogresspurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasreshape2rlangrnclRNeXMLS7scalesspSparseMstringistringrsurvivalsystibbletidyrtidyselecttimeDateurcautf8uuidvctrsviridisLitewithrXMLxml2zoo