Package: mvMORPH 1.2.1
mvMORPH: Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series. 'mvMORPH' also proposes high-dimensional multivariate comparative tools (linear models using Generalized Least Squares and multivariate tests) based on penalized likelihood. See Clavel et al. (2015) <doi:10.1111/2041-210X.12420>, Clavel et al. (2019) <doi:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) <doi:10.1093/sysbio/syaa010>.
Authors:
mvMORPH_1.2.1.tar.gz
mvMORPH_1.2.1.zip(r-4.5)mvMORPH_1.2.1.zip(r-4.4)mvMORPH_1.2.1.zip(r-4.3)
mvMORPH_1.2.1.tgz(r-4.4-x86_64)mvMORPH_1.2.1.tgz(r-4.4-arm64)mvMORPH_1.2.1.tgz(r-4.3-x86_64)mvMORPH_1.2.1.tgz(r-4.3-arm64)
mvMORPH_1.2.1.tar.gz(r-4.5-noble)mvMORPH_1.2.1.tar.gz(r-4.4-noble)
mvMORPH_1.2.1.tgz(r-4.4-emscripten)mvMORPH_1.2.1.tgz(r-4.3-emscripten)
mvMORPH.pdf |mvMORPH.html✨
mvMORPH/json (API)
NEWS
# Install 'mvMORPH' in R: |
install.packages('mvMORPH', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jclavel/mvmorph/issues
- phyllostomid - Phylogeny and trait data for a sample of Phyllostomid bats
Last updated 10 days agofrom:4210caa128. Checks:OK: 9. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 28 2024 |
R-4.5-win-x86_64 | OK | Aug 28 2024 |
R-4.5-linux-x86_64 | OK | Aug 28 2024 |
R-4.4-win-x86_64 | OK | Aug 28 2024 |
R-4.4-mac-x86_64 | OK | Aug 28 2024 |
R-4.4-mac-aarch64 | OK | Aug 28 2024 |
R-4.3-win-x86_64 | OK | Aug 28 2024 |
R-4.3-mac-x86_64 | OK | Aug 28 2024 |
R-4.3-mac-aarch64 | OK | Aug 28 2024 |
Exports:aicwancestraldfaShapeeffectsizeEICestimGIChalflifeLRTmanova.glsmv.PrecalcmvBMmvEBmvglsmvgls.dfamvgls.pcamvLLmvolsmvOUmvOUTSmvqqplotmvRWTSmvSHIFTmvSIMpairwise.contrastspairwise.glhpcaShapepruningstationary
Dependencies:apecliclusterGenerationcodacodetoolscolorspacecombinatcorpcorcpp11DEoptimdigestdoParalleldotCall64expmfansifarverfastmatchforeachgenericsggplot2ggseqlogoglassoFastgluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmgcvmnormtmunsellnlmenumDerivoptimParallelpbmcapplyphangornphytoolspillarpkgconfigquadprogR6RColorBrewerRcpprlangscalesscatterplot3dspamsubplextibbleutf8vctrsviridisLitewithr
How to use mvMORPH?
Rendered fromHow_to_use_mvMORPH.Rmd
usingknitr::rmarkdown
on Aug 28 2024.Last update: 2023-03-13
Started: 2016-06-06
mvMORPH: an R package for fitting multivariate evolutionary models
Rendered fromtutorial_mvMORPH.Rmd
usingknitr::rmarkdown
on Aug 28 2024.Last update: 2016-10-13
Started: 2015-05-29