Package: dispRity 1.8.11
dispRity: Measuring Disparity
A modular package for measuring disparity (multidimensional space occupancy). Disparity can be calculated from any matrix defining a multidimensional space. The package provides a set of implemented metrics to measure properties of the space and allows users to provide and test their own metrics. The package also provides functions for looking at disparity in a serial way (e.g. disparity through time) or per groups as well as visualising the results. Finally, this package provides several statistical tests for disparity analysis.
Authors:
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dispRity.pdf |dispRity.html✨
dispRity/json (API)
NEWS
# Install 'dispRity' in R: |
install.packages('dispRity', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tguillerme/disprity/issues
- BeckLee_ages - Beck and Lee 2014 datasets
- BeckLee_disparity - BeckLee_disparity
- BeckLee_mat50 - Beck and Lee 2014 datasets
- BeckLee_mat99 - Beck and Lee 2014 datasets
- BeckLee_tree - Beck and Lee 2014 datasets
- charadriiformes - Charadriiformes
- demo_data - Demo datasets
- disparity - Disparity
disparityecologymultidimensionalitypalaeobiology
Last updated 25 days agofrom:e5711ad4e4. Checks:OK: 1 WARNING: 6 ERROR: 2. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 13 2024 |
R-4.5-win-x86_64 | WARNING | Aug 13 2024 |
R-4.5-linux-x86_64 | WARNING | Aug 13 2024 |
R-4.4-win-x86_64 | WARNING | Aug 13 2024 |
R-4.4-mac-x86_64 | WARNING | Aug 13 2024 |
R-4.4-mac-aarch64 | ERROR | Aug 13 2024 |
R-4.3-win-x86_64 | WARNING | Aug 13 2024 |
R-4.3-mac-x86_64 | WARNING | Aug 13 2024 |
R-4.3-mac-aarch64 | ERROR | Aug 13 2024 |
Exports:add.treeadonis.dispRityancestral.distanglesapply.NAas.covaraxis.covarbhatt.coeffboot.matrixcentroidschar.diffcheck.morphochrono.subsetsCladdis.ordinationclean.datacombine.subsetsconvhull.surfaceconvhull.volumecount.neighbourscovar.plotcrown.stemcustom.subsetsdeviationsdiagonaldimension.level1.fundimension.level2.fundimension.level3.fundisalignmentdisplacementsdispRitydispRity.covar.projectionsdispRity.fastdispRity.per.groupdispRity.through.timedistance.randtestdtt.dispRityedge.length.treeellipse.volumeellipsoid.volumeextinction.subsetsfill.dispRityfunc.divfunc.evegeomorph.ordinationget.bin.agesget.contrast.matrixget.covarget.disparityget.matrixget.subsetsget.treegroup.distmake.dispRitymake.metricmatch.tip.edgeMCMCglmm.covarsMCMCglmm.levelsMCMCglmm.sampleMCMCglmm.subsetsMCMCglmm.traitsMCMCglmm.variancemode.valmodel.testmodel.test.simmodel.test.wrappermulti.acen.ball.volumen.subsetsname.subsetsneighboursnull.testpair.plotpairwise.distpgls.dispRityplot.char.diffplot.dispRitypoint.distprint.dispRityprojectionsprojections.betweenprojections.treequantilesradiusrandom.circlerandtest.dispRityrangesreduce.matrixreduce.spaceremove.dispRityremove.treeremove.zero.brlenrescale.dispRityroundnessscale.dispRityselect.axesset.root.timesim.morphosize.subsetsslice.treeslide.nodessort.dispRityspace.makerspan.tree.lengthsummary.dispRitytest.dispRitytest.metrictree.agevariances
Dependencies:abindade4apecastorCladdisclicliprclusterclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdigestdoParallelellipseexpmfansifarverfastmatchforeachfuturefuture.applygenericsgeometrygeoscaleGETggplot2ggseqlogoglobalsgluegmpgridExtragtableigraphisobanditeratorsjsonlitelabelinglatticelifecyclelinproglistenvlpSolvemagicmagrittrmapsMASSmathjaxrMatrixmgcvmnormtmulticoolmunsellnaturalsortnlmenumDerivoptimParallelparallellypartitionspbapplypermutephangornphyclustphylolmphytoolspillarpixmappkgconfigpolynomquadprogR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRcppProgressRdpackrlangRSpectrascalesscatterplot3dsetsspstraptibbleutf8vctrsveganviridisLitewithrzoo