Package: TBRDist 1.0.2

Martin R. Smith

TBRDist: Rearrangement Distances Between Unrooted Phylogenetic Trees

Fast calculation of the Subtree Prune and Regraft (SPR), Tree Bisection and Reconnection (TBR) and Replug distances between unrooted trees, using the algorithms of Whidden and Matsen (2017) <arxiv:1511.07529>.

Authors:Martin R. Smith [aut, cre, cph], Chris Whidden [cph]

TBRDist_1.0.2.tar.gz
TBRDist_1.0.2.zip(r-4.5)TBRDist_1.0.2.zip(r-4.4)TBRDist_1.0.2.zip(r-4.3)
TBRDist_1.0.2.tgz(r-4.4-x86_64)TBRDist_1.0.2.tgz(r-4.4-arm64)TBRDist_1.0.2.tgz(r-4.3-x86_64)TBRDist_1.0.2.tgz(r-4.3-arm64)
TBRDist_1.0.2.tar.gz(r-4.5-noble)TBRDist_1.0.2.tar.gz(r-4.4-noble)
TBRDist_1.0.2.tgz(r-4.4-emscripten)TBRDist_1.0.2.tgz(r-4.3-emscripten)
TBRDist.pdf |TBRDist.html✨
TBRDist/json (API)
NEWS

# Install 'TBRDist' in R:

install.packages('TBRDist', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ms609/tbrdist/issues

Uses libs:

c++– GNU Standard C++ Library v3

On CRAN:

phylogenetics tree-distance distance-calculation phylogenetic-trees

3.70 score 129 downloads 7 exports 50 dependencies

Last updated 3 years agofrom:9765597e84. Checks:OK: 1 NOTE: 8. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Nov 05 2024
R-4.5-win-x86_64	NOTE	Nov 05 2024
R-4.5-linux-x86_64	NOTE	Nov 05 2024
R-4.4-win-x86_64	NOTE	Nov 05 2024
R-4.4-mac-x86_64	NOTE	Nov 05 2024
R-4.4-mac-aarch64	NOTE	Nov 05 2024
R-4.3-win-x86_64	NOTE	Nov 05 2024
R-4.3-mac-x86_64	NOTE	Nov 05 2024
R-4.3-mac-aarch64	NOTE	Nov 05 2024