Package: AnnotationBustR 1.3.0
AnnotationBustR: Extract Subsequences from GenBank Annotations
Extraction of subsequences into FASTA files from GenBank annotations where gene names may vary among accessions. Borstein & O'Meara (2018) <doi:10.7717/peerj.5179>.
Authors:
AnnotationBustR_1.3.0.tar.gz
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AnnotationBustR.pdf |AnnotationBustR.html✨
AnnotationBustR/json (API)
NEWS
# Install 'AnnotationBustR' in R: |
install.packages('AnnotationBustR', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/sborstein/annotationbustr/issues
- cpDNAterms - Chloroplast DNA (cpDNA) Search Terms
- mtDNAterms - Mitochondrial DNA Search Terms for Animals
- mtDNAtermsPlants - Mitochondrial DNA Search Terms for Plants
- rDNAterms - Ribosomal DNA (rDNA) Search Terms
Last updated 7 months agofrom:75cb320c45. Checks:ERROR: 1 WARNING: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | FAIL | Aug 12 2024 |
R-4.5-win | WARNING | Aug 12 2024 |
R-4.5-linux | WARNING | Aug 12 2024 |
R-4.4-win | WARNING | Aug 12 2024 |
R-4.4-mac | WARNING | Aug 12 2024 |
R-4.3-win | WARNING | Aug 12 2024 |
R-4.3-mac | WARNING | Aug 12 2024 |
Exports:AnnotationBustFindLongestSeqMergeSearchTerms
Dependencies:ade4apedigestlatticeMASSnlmepixmapRcppRcppArmadillosegmentedseqinrsp
AnnotationBustR Tutorial
Rendered fromAnnotationBustR-vignette.Rmd
usingknitr::rmarkdown
on Aug 12 2024.Last update: 2020-09-24
Started: 2016-05-25