Package: AnnotationBustR 1.3.0

Samuel R. Borstein

AnnotationBustR: Extract Subsequences from GenBank Annotations

Extraction of subsequences into FASTA files from GenBank annotations where gene names may vary among accessions. Borstein & O'Meara (2018) <doi:10.7717/peerj.5179>.

Authors:Samuel R. Borstein <[email protected]>, Brian O'Meara <[email protected]>

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AnnotationBustR.pdf |AnnotationBustR.html✨
AnnotationBustR/json (API)
NEWS

# Install 'AnnotationBustR' in R:
install.packages('AnnotationBustR', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/sborstein/annotationbustr/issues

Datasets:

On CRAN:

3 exports 5 stars 1.48 score 12 dependencies 1 mentions 12 scripts 417 downloads

Last updated 7 months agofrom:75cb320c45. Checks:ERROR: 1 WARNING: 6. Indexed: no.

TargetResultDate
Doc / VignettesFAILAug 12 2024
R-4.5-winWARNINGAug 12 2024
R-4.5-linuxWARNINGAug 12 2024
R-4.4-winWARNINGAug 12 2024
R-4.4-macWARNINGAug 12 2024
R-4.3-winWARNINGAug 12 2024
R-4.3-macWARNINGAug 12 2024

Exports:AnnotationBustFindLongestSeqMergeSearchTerms

Dependencies:ade4apedigestlatticeMASSnlmepixmapRcppRcppArmadillosegmentedseqinrsp

AnnotationBustR Tutorial

Samuel R. Borstein

Rendered fromAnnotationBustR-vignette.Rmdusingknitr::rmarkdownon Aug 12 2024.

Last update: 2020-09-24
Started: 2016-05-25