Package: AnnotationBustR 1.3.0

Samuel R. Borstein

AnnotationBustR: Extract Subsequences from GenBank Annotations

Extraction of subsequences into FASTA files from GenBank annotations where gene names may vary among accessions. Borstein & O'Meara (2018) <doi:10.7717/peerj.5179>.

Authors:Samuel R. Borstein [aut, cre], Brian O'Meara [aut]

AnnotationBustR_1.3.0.tar.gz
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AnnotationBustR.pdf |AnnotationBustR.html✨
AnnotationBustR/json (API)
NEWS

# Install 'AnnotationBustR' in R:
install.packages('AnnotationBustR', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/sborstein/annotationbustr/issues

Datasets:

On CRAN:

4.78 score 5 stars 12 scripts 333 downloads 1 mentions 3 exports 12 dependencies

Last updated 3 months agofrom:0fe69bf361. Checks:ERROR: 1 WARNING: 6. Indexed: no.

TargetResultDate
Doc / VignettesFAILDec 03 2024
R-4.5-winWARNINGDec 03 2024
R-4.5-linuxWARNINGDec 03 2024
R-4.4-winWARNINGDec 03 2024
R-4.4-macWARNINGDec 03 2024
R-4.3-winWARNINGDec 03 2024
R-4.3-macWARNINGDec 03 2024

Exports:AnnotationBustFindLongestSeqMergeSearchTerms

Dependencies:ade4apedigestlatticeMASSnlmepixmapRcppRcppArmadillosegmentedseqinrsp

AnnotationBustR Tutorial

Samuel R. Borstein

Rendered fromAnnotationBustR-vignette.Rmdusingknitr::rmarkdownon Dec 03 2024.

Last update: 2020-09-24
Started: 2016-05-25