Package: treebase 0.1.5

Carl Boettiger

treebase: Discovery, Access and Manipulation of 'TreeBASE' Phylogenies

Interface to the API for 'TreeBASE' <http://treebase.org> from 'R.' 'TreeBASE' is a repository of user-submitted phylogenetic trees (of species, population, or genes) and the data used to create them.

Authors:Carl Boettiger [aut, cre], Duncan Temple Lang [aut]

treebase_0.1.5.tar.gz
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treebase.pdf |treebase.html✨
treebase/json (API)
NEWS

# Install 'treebase' in R:
install.packages('treebase', repos = c('https://phylotastic.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/treebase/issues

Pkgdown:https://docs.ropensci.org

Datasets:

On CRAN:

6.13 score 10 stars 45 scripts 238 downloads 3 mentions 7 exports 16 dependencies

Last updated 10 months agofrom:5954c072bb. Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 12 2024
R-4.5-winOKDec 12 2024
R-4.5-linuxOKDec 12 2024
R-4.4-winOKDec 12 2024
R-4.4-macOKDec 12 2024
R-4.3-winOKDec 12 2024
R-4.3-macOKDec 12 2024

Exports:cache_treebasedownload_metadatadrop_nontreesdryad_metadatahave_branchlengthmetadatasearch_treebase

Dependencies:apeaskpassbitopscurldigesthttrjsonlitelatticemimenlmeopensslR6RcppRCurlsysXML

Treebase Tutorial

Carl Boettiger

Rendered fromvignette.Rmdusingknitr::rmarkdownon Dec 12 2024.

Last update: 2024-02-16
Started: 2014-02-20