{ "_id": "6a5727e7ff0138dec5d6e726", "Package": "phrapl", "Version": "0.6.5", "Date": "2021-02-05", "Title": "Phylogeography using Approximate Likelihood", "Authors@R": "c(person(\"Brian\", \"O'Meara\", role = c(\"aut\", \"cre\"),\nemail = \"omeara.brian@gmail.com\"),\nperson(\"Bryan\", \"Carstens\", role = \"aut\"),\nperson(\"Nathan\", \"Jackson\", role = \"aut\"),\nperson(\"Ariadna\", \"Morales-Garcia\", role = \"aut\"))", "Description": "This creates and compares models for population structure\nwithin a species or between several related species, especially\nfor questions in phylogeography. It can also help delimit\npopulations into species. Models used can range from island\nmodels (populations exchanging genes through migration) to\nphylogeny models (populations splitting with no subsequent gene\nflow) to anything in between, such as subdivision with some\ngene flow. Input data are gene tree topologies. Models are fit\nusing approximate likelihood: simulating gene tree evolution\nmany times on the various population trees to estimate the\nlikelihood of seeing the observed gene topologies.", "SystemRequirements": "perl", "LazyData": "no", "License": "GPL (>= 2)", "Encoding": "UTF-8", "RoxygenNote": "7.1.0", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "cmake libfreetype6-dev libglpk-dev libglu1-mesa-dev\nlibgmp3-dev make texlive libpng-dev libuv1-dev libxml2-dev\nlibgl1-mesa-dev perl zlib1g-dev", "Repository": "https://phylotastic.r-universe.dev", "Date/Publication": "2021-02-06 04:42:35 UTC", "RemoteUrl": "https://github.com/bomeara/phrapl", "RemoteRef": "HEAD", "RemoteSha": "318b236693bcfc8d763fdbde49bd10ecd2bc861f", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-15 06:17:35 UTC", "User": "root" }, "Author": "Brian O'Meara [aut, cre],\nBryan Carstens [aut],\nNathan Jackson [aut],\nAriadna Morales-Garcia [aut]", "Maintainer": "Brian O'Meara ", "_user": "phylotastic", 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