Package: AnnotationBustR
Version: 2.0
Date: 2026-06-15
Title: Extract Subsequences from GenBank Annotations
Authors@R: 
  c(person(given = "Samuel R.",
           family = "Borstein",
           role = c("aut", "cre"),
           email = "sam@borstein.com",
           comment = c(ORCID = "0000-0002-7258-141X")),
    person(given = "Brian",
           family = "O'Meara",
           role = "aut",
		   email = "bomeara@utk.ed",
           comment = c(ORCID = "0000-0002-0337-5997")))
Maintainer: Samuel R. Borstein <sam@borstein.com>
Depends: R (>= 4.5)
biocViews:
Imports: ape (>= 5.8-1), Biostrings (>= 2.80.0), BSgenome (>= 1.80.0),
        dplyr (>= 1.2.1), GenomicFeatures (>= 1.64.0), GenomicRanges
        (>= 1.64.0), magrittr (>= 2.0.5), rentrez (>= 1.2.4), stringr
        (>= 1.6.0)
Description: Extraction of subsequences into FASTA files from GenBank
        annotations where gene names may vary among accessions.
        Borstein & O'Meara (2018) <doi:10.7717/peerj.5179>.
License: GPL (>= 2)
LazyData: true
Suggests: knitr, rmarkdown, seqinr, testthat
VignetteBuilder: knitr
URL: https://github.com/sborstein/AnnotationBustR,
        https://www.ncbi.nlm.nih.gov/nuccore,
        https://peerj.com/articles/5179/
BugReports: https://github.com/sborstein/AnnotationBustR/issues
Encoding: UTF-8
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://phylotastic.r-universe.dev
Date/Publication: 2026-06-16 20:49:43 UTC
RemoteUrl: https://github.com/sborstein/AnnotationBustR
RemoteRef: HEAD
RemoteSha: acb0d456e083fc982a542fffff4bc5ddec38372a
NeedsCompilation: no
Packaged: 2026-06-16 20:56:32 UTC; root
Author: Samuel R. Borstein [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-7258-141X>),
  Brian O'Meara [aut] (ORCID: <https://orcid.org/0000-0002-0337-5997>)